You
may want to install the Chime plug
in. The Chime plug-in allows you to view molecules in 3 dimension.
Download the plug-in, follow the instructions, and away you go.
The right
mouse
button
is very
important
in manipulating
the
Chime 3-D structures, play with it to see the molecules in different
ways! Viewing the molecules in 3-D is NOT required
for this PreLab
Proteins
You have heard before that the four types of biological macromolecules
are all polymers. Carbohydrates are sugar polymers. We built lipids from
fatty acids, phosphate groups,
and glycerol. Now we come to proteins, which are also polymeric.
The subunits which make-up Proteins are Amino Acids. The amino
acids are joined together by a dehydration synthesis reaction to form
chains, which are hundreds of amino acids long; called proteins.
Proteins function
as enzymes or as structural units in cells. They do most of the "work" in
a cell. Almost all of the exciting stuff; metabolism, memory, hormone
action, and movement involves proteins.
Amino acids are aptly named.
See which functional groups you recognize as part of this amino
acid. You will also notice there is an R as part of this molecule.
There is no element with the abbreviation, R. This letter is
used as a sort of chemical variable, like X in math. At this position
(the R-group) in an amino acid, different functional groups can
be present. There are twenty different types of amino acids found
in proteins. Each has a different R-group.
As we just said....
there are twenty
different types of amino acids found in proteins: The eight
essential amino acids are
shown in bold in the table below. Essential amino acids must be acquired
in the diet; whereas nonessential amino acids can be synthesized
by the body. Complete
dietary proteins contain both the essential and nonessential amino
acids. Incomplete proteins are missing one or more amino acids. As
you eat them, proteins are digested and degraded by enzymes in the
stomach. This process takes the proteins you
consume and coverts them into the component amino acids by breaking
the covalent bonds which connect the subunits of the proteins. The amino
acids are then "reused" to make new, different proteins
The links below will
show the structure of each amino acid in 3-D, but you must have the
CHIME plug-in installed. Viewing the molecules in 3-D is NOT required
for this PreLab.